Brought to you by NOAA NMFS SWFSC ERD
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Biological and Socioeconomics
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Brought to you by NOAA NMFS SWFSC ERD |
| Dataset Title: | Dry_Tortugas_Visual_Census_OBIS_Occurrence_v3.5_2012
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| Institution: | NOAA Southeast Fischeries Science Center (Dataset ID: dt_OBIS_Occurrence_v3_5_2012) |
| Information: | Summary
| License
| FGDC
| ISO 19115
| Metadata
| Background
| Subset
| Files
| Make a graph
|
Attributes {
s {
obs {
Int32 _FillValue -999;
Int32 actual_range 0, 385012;
String ioos_category "Unknown";
String long_name "Obs";
}
time {
UInt32 _ChunkSizes 385013;
String _CoordinateAxisType "Time";
Float64 actual_range 1.3384656e+9, 1.3439088e+9;
String axis "T";
String calendar "gregorian";
Float64 colorBarMaximum 1.346e+9;
Float64 colorBarMinimum 1.338e+9;
String comment "Measurements were performed between April and September sometimes weather perminting into November, but no specific date was given.";
String coverage_content_type "time";
String ioos_category "Time";
String long_name "Time";
String standard_name "time";
String standard_name_url "https://mmisw.org/ont/cf/parameter/time";
String time_origin "01-JAN-1970 00:00:00";
String units "seconds since 1970-01-01T00:00:00Z";
Float64 valid_max 1.3439088e+9;
Float64 valid_min 1.3384656e+9;
}
eventDate {
UInt32 _ChunkSizes 385013, 5;
String coverage_content_type "referenceInformation";
String description "The date and time of observation expressed in local time using the standard ISO 8601:2004(E).";
String ioos_category "Time";
String long_name "Event Date";
String standard_name "eventdate";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
latitude {
UInt32 _ChunkSizes 385013;
String _CoordinateAxisType "Lat";
Float64 _FillValue -99999.0;
Float64 actual_range 24.5519333, 24.7284333;
String axis "Y";
Float64 colorBarMaximum 90.0;
Float64 colorBarMinimum -90.0;
String coverage_content_type "coordinate";
String description "The position of the observation north or south of the equator in decimal degrees.";
String ioos_category "Location";
String long_name "Latitude";
Float64 missing_value -99999.0;
String standard_name "latitude";
String standard_name_url "https://mmisw.org/ont/cf/parameter/latitude";
String units "degrees_north";
Float64 valid_max 24.7284333;
Float64 valid_min 24.5519333;
}
longitude {
UInt32 _ChunkSizes 385013;
String _CoordinateAxisType "Lon";
Float64 _FillValue -99999.0;
Float64 actual_range -83.1035167, -82.7729667;
String axis "X";
Float64 colorBarMaximum 180.0;
Float64 colorBarMinimum -180.0;
String coverage_content_type "coordinate";
String description "The position of the observation east or west of the prime meridian in decimal degrees.";
String ioos_category "Location";
String long_name "Longitude";
Float64 missing_value -99999.0;
String standard_name "longitude";
String standard_name_url "https://mmisw.org/ont/cf/parameter/longitude";
String units "degrees_east";
Float64 valid_max -82.7729667;
Float64 valid_min -83.1035167;
}
datasetID {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "An identifier for the set of data. May be a global unique identifier or an identifier specific to a collection or institution.";
String ioos_category "Identifier";
String long_name "Dataset Identification Number";
String standard_name "data_set_id";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
datasetName {
UInt32 _ChunkSizes 128338, 19;
String coverage_content_type "referenceInformation";
String description "The name identifying the data set from which the record was derived. ";
String ioos_category "Identifier";
String long_name "Dataset Name";
String standard_name "data_set_name";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
ownerInstitutionCode {
UInt32 _ChunkSizes 385013, 5;
String coverage_content_type "auxiliaryInformation";
String description "An abbreviation that identifies the institution, that is considered the owner or controller of the data. FKNMS= Florida Keys National Marine Sanctuary";
String ioos_category "Other";
String long_name "Owner Institution Code";
String standard_name "owner_institution_code";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
eventID {
UInt32 _ChunkSizes 192507, 13;
String coverage_content_type "referenceInformation";
String description "An identifier for the set of information associated with an Event. May be a global unique identifier or an identifier specific to the data set.";
String ioos_category "Identifier";
String long_name "Event Identification Number (Date_primarySampleUnit_MapGridNumber_station#)";
String standard_name "event_identification_number";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
basisOfRecord {
UInt32 _ChunkSizes 192507, 10;
String coverage_content_type "auxiliaryInformation";
String description "Identifies the source of information or observation that generated the biological occurrence record. (http://rs.tdwg.org/dwc/terms/#basisOfRecord)";
String ioos_category "Other";
String long_name "basis Of Record";
String standard_name "basis_of_record";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
recordedBy {
UInt32 _ChunkSizes 385013, 5;
String coverage_content_type "auxiliaryInformation";
String description "The name or other identifier of individual(s) or institution(s) responsible for making the observation and recording it in electronic form. Can be a list delimited by semicolon.";
String ioos_category "Other";
String long_name "recorded By";
String standard_name "recorded_by";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
occurrenceID {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "auxiliaryInformation";
String description "An identifier for the Occurrence (as opposed to a particular digital record of the occurrence). In the absence of a persistent global unique identifier, construct one from a combination of identifiers in the record that will most closely make the occurrenceID globally unique.";
String ioos_category "Identifier";
String long_name "occurrenceID (Year_subRegionID_habitatID_SiteCode_siteID_station#_scientificNameID";
String standard_name "occurrence_identification";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
organismQuantity {
UInt32 _ChunkSizes 385013;
Float64 _FillValue -99999.0;
Float64 actual_range 0.0, 2500.0;
Float64 colorBarMaximum 100.0;
Float64 colorBarMinimum 0.0;
String coverage_content_type "physicalMeasuremnet";
String description "A number or enumeration value for the quantity of organisms.";
String ioos_category "Biology";
String long_name "Average count of observed species per 5 minutes).";
Float64 missing_value -99999.0;
String standard_name "organism_quantity";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
String units "count";
Float64 valid_max 2500.0;
Float64 valid_min 0.0;
}
organismQuantityType {
UInt32 _ChunkSizes 128338, 17;
String coverage_content_type "auxiliaryInformation";
String description "The type of quantification system used for the quantity of organisms; e.g., \"27\" for organismQuantity with \"individuals\" for organismQuantityType; \"12.5\" for organismQuantity with \"%biomass\" for organismQuantityType.";
String ioos_category "Biology";
String long_name "average number of fish seen at given length (buddy pair system) within a 5 Minutes interval";
String standard_name "organism_quantity_type";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
occurrenceStatus {
UInt32 _ChunkSizes 385013, 5;
String coverage_content_type "auxiliaryInformation";
String description "This is a one-character string with enumerated values indicating what type of occurrence this record represents. \"P\" for presence (and no quantification) or \"A\" for absence.";
String ioos_category "Biology";
String long_name "A statement about the presence or absence of a Taxon at a Location.";
String standard_name "occurrence_status";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
scientificName {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "The full scientific name, with authorship and date information if known. When forming part of an Identification, this should be the name in lowest level taxonomic rank that can be determined.";
String ioos_category "Taxonomy";
String long_name "Scientific Name";
String standard_name "biological_taxon_name";
String standard_name_url "https://mmisw.org/ont/cf/parameter/biological_taxon_name";
}
acceptedNameUsage {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "The full name, with authorship and date information if known, of the currently valid (zoological) or accepted (botanical) taxon.";
String ioos_category "Taxonomy";
String long_name "accepted Name Usage";
String standard_name "biological_taxon_name";
String standard_name_url "https://mmisw.org/ont/cf/parameter/biological_taxon_name";
}
vernacularName {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "A common or vernacular name for the taxon observed.";
String ioos_category "Taxonomy";
String long_name "Common, vernacular Name";
String standard_name "vernacular_name";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
scientificNameID {
UInt32 _ChunkSizes 128338, 15;
String coverage_content_type "referenceInformation";
String description "A unique taxon identifier obtained by validation of the taxon name with the World Register of Marine Species (WoRMS), www.marinespecies.org.";
String ioos_category "Identifier";
String long_name "World Register of Marine Species (WoRMS) Aphia Database Identification Number";
String standard_name "biological_taxon_lsid";
String standard_name_url "https://mmisw.org/ont/cf/parameter/biological_taxon_lsid";
}
acceptedNameUsageID {
UInt32 _ChunkSizes 128338, 15;
String coverage_content_type "referenceInformation";
String description "An identifier for the name usage (documented meaning of the name according to a source) of the currently valid (zoological) or accepted (botanical) taxon.";
String ioos_category "Identifier";
String long_name "Accepted WoRMS Aphia Database Identification Number";
String standard_name "biological_taxon_lsid";
String standard_name_url "https://mmisw.org/ont/cf/parameter/biological_taxon_lsid";
}
kingdom {
UInt32 _ChunkSizes 192507, 8;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the kingdom in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Kingdom";
String standard_name "kingdom";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
phylum {
UInt32 _ChunkSizes 192507, 10;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the phylum in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Phylum";
String standard_name "phylum";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
class {
UInt32 _ChunkSizes 192507, 10;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the class in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Class";
String standard_name "class";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
order {
UInt32 _ChunkSizes 192507, 15;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the order in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Order";
String standard_name "order";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
family {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the family in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Family";
String standard_name "family";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
genus {
UInt32 _ChunkSizes 192507, 10;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the genus in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Genus";
String standard_name "genus";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
specificEpithet {
UInt32 _ChunkSizes 192507, 10;
String coverage_content_type "referenceInformation";
String description "The full scientific name of the species in which the taxon is classified.";
String ioos_category "Taxonomy";
String long_name "Species Name";
String standard_name "species_name";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
taxonRank {
UInt32 _ChunkSizes 385013, 5;
String coverage_content_type "referenceInformation";
String description "The taxonomic rank of the most specific name in the scientificName. Recommended best practice is to use a controlled vocabulary.";
String ioos_category "Taxonomy";
String long_name "Taxon Rank,taxonomic hierarchy of the Scientific Name";
String standard_name "taxon_rank";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
scientificNameAuthorship {
UInt32 _ChunkSizes 192507, 18;
String coverage_content_type "referenceInformation";
String description "The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode.";
String ioos_category "Taxonomy";
String long_name "Authorship information for the scientificName";
String standard_name "authorship_information";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
taxonomicStatus {
UInt32 _ChunkSizes 192507, 13;
String coverage_content_type "referenceInformation";
String description "The status of the use of the scientificName as a label for a taxon..";
String ioos_category "Taxonomy";
String long_name "Taxonomic Status: Accepted; Unaccepted";
String standard_name "taxonomic_status";
String standard_name_url "https://mmisw.org/ont/cf/parameter/unknown";
}
}
NC_GLOBAL {
String _NCProperties "version=1|netcdflibversion=4.6.1|hdf5libversion=1.8.12";
String acknowledgment "unknown";
String cdm_data_type "Point";
String comments "Variable description can also be found in: http://mmisw.org/orr/#http://mmisw.org/ont/ioos/marine_biogeography";
String contributor_country "USA";
String contributor_email "jeremiah.blondeau@noaa.gov";
String contributor_institution "Cooperative Institute for Marine and Atmospheric Studies";
String contributor_name "Jeremiah Blondeau";
String contributor_phone "+1-305-361-4249";
String contributor_role "Research Scientist/Data Manager";
String contributor_role_vocabulary "https://vocab.nerc.ac.uk/collection/G04/current/";
String contributor_type "person";
String contributor_url "unknown";
String Conventions "CF-1.6, ACDD-1.3, IOOS-1.2";
String Country " United States";
String creator_address "75 Virginia Beach Drive";
String creator_city "Miami";
String creator_country "USA";
String creator_email "Jim.Bohnsack@noaa.gov";
String creator_institution "NOAA Southeast Fischeries Science Center";
String creator_name "James A. Bohnsack";
String creator_phone "+1-305-361-4252";
String creator_postalcode "33149";
String creator_sector "academic";
String creator_state "Florida";
String creator_type "person";
String creator_url "https://www.sefsc.noaa.gov/staff/jimbohnsack.htm";
String date_created "2016-10-20T16:40:00Z";
String date_issued "2016-10-20T16:40:00Z";
String date_metadata_modified "2021-12-28T04:45:08Z";
String date_modified "2021-12-28T04:45:08Z";
Float64 Easternmost_Easting -82.7729667;
String featureType "Point";
String geospatial_bounds "POLYGON ((24.00 -83.10, 26.00, -83.10, 26.00, -80.00, 24.00 -80.00, 24.00 -83.10))";
String geospatial_bounds_crs "EPSG:4326";
Float64 geospatial_lat_max 24.7284333;
Float64 geospatial_lat_min 24.5519333;
String geospatial_lat_units "degrees_north";
Float64 geospatial_lon_max -82.7729667;
Float64 geospatial_lon_min -83.1035167;
String geospatial_lon_units "degrees_east";
String geospatial_vertical_positive "down";
String geospatial_vertical_units "m";
String history
"csv files were created in 2016-10-20 16:40
2024-04-27T17:11:28Z (local files)
2024-04-27T17:11:28Z https://gcoos4.geos.tamu.edu/erddap/tabledap/dt_OBIS_Occurrence_v3_5_2012.html";
String id "Dry_Tortugas_Reef_Visual_Census";
String infoUrl "https://www.fisheries.noaa.gov/southeast/science-data/reef-ecology-unit";
String institution "NOAA Southeast Fischeries Science Center";
String instrument "unknown";
String instrument_vocabulary "GCMD Science Keywords Version 9.1.5";
String keywords "about, absence, accepted, acceptedNameUsage, acceptedNameUsageID, aphia, array, array-data, authorship, authorship_information, average, basis, basis_of_record, basisOfRecord, biological, biological_taxon_lsid, biological_taxon_name, biology, buddy, census, center, class, code, common, comprehensive, count, data, data_set_id, data_set_name, database, dataset, datasetID, datasetName, date, dry, dry tortugas, event, eventdate, eventID, family, fischeries, fish, fish sampling, florida keys, genus, given, gulf of mexico, habitatid, hierarchy, identification, identifier, information, institution, interval, kingdom, large, latitude, length, longitude, lsid, mapgridnumber, marine, minutes, name, noaa, number, obs, observations, observed, occurrence, occurrence_identification, occurrence_status, occurrenceid, occurrenceStatus, order, organism, organism_quantity, organism_quantity_type, organismQuantity, organismQuantityType, owner, owner_institution_code, ownerInstitutionCode, pair, per, phylum, presence, primarysampleunit, quantity, rank, record, recorded, recorded_by, recordedBy, reef, register, science, scientific, scientificname, scientificNameAuthorship, scientificnameid, seen, set, sitecode, siteid, southeast, species, species_name, specificEpithet, statement, station, status, stewardship, subregionid, system, taxon, taxon_rank, taxonomic, taxonomic_status, taxonomicStatus, taxonomy, taxonRank, time, tortugas, type, unaccepted, usage, vernacular, vernacular_name, vernacularName, visual, within, world, worms, year";
String keywords_vocabulary "GCMD Science Keywords Version 9.1.5, CF Standard Names v77";
String license "https://creativecommons.org/publicdomain/zero/1.0/legalcode";
String metadata_link "https://gcoos4.tamu.edu/erddap/info/index.html?page=1&itemsPerPage=1000";
String naming_authority "sefsc.noaa.gov";
String ncei_template_version "NCEI_NetCDF_Point_Template_v2.0";
Float64 Northernmost_Northing 24.7284333;
String platform "unknown";
String platform_id "unknown";
String platform_name "unknown";
String platform_vocabulary "https://mmisw.org/ont/ioos/platform";
String processing_level "Geophysical units from raw data";
String processor_address "3146 TAMU, Eller O&M Building";
String processor_city "College Station";
String processor_country "USA";
String processor_email "mstoessel@ocean.tamu.edu";
String processor_institution "GCOOS at Texas A&M University, Dept. of Oceanography";
String processor_name "Marion Stoessel";
String processor_phone "+1-979-845-7662";
String processor_postalcode "77843";
String processor_role "Senior Research Associate/Data Manager";
String processor_state "Texas";
String processor_type "person";
String processor_url "https://oceanography.tamu.edu/people/profiles/research-staff/stosselmarion.html";
String product_version "v3.5";
String program "Dry_Tortugas_Reef_Visual_Census2012";
String project " Dry Tortugas Reef Visual Census2012";
String publisher_address "3146 TAMU, Eller O&M Building";
String publisher_city "College Station";
String publisher_country "USA";
String publisher_email "data@gcoos.org";
String publisher_institution "Gulf of Mexico Coastal Ocean Observing System";
String publisher_name "GCOOS";
String publisher_phone "+1-979-458-3274";
String publisher_postalcode "77843";
String publisher_role "Data Manager";
String publisher_state "Texas";
String publisher_type "person";
String publisher_url "https://gcoos.org";
String references "Smith,S.G., et al. 2011,Multispecies survey design for assessing reef-fish stocks, spatially explicit management performance, and ecosystem condition. Fisheries Research 109(2011)25-41; Brandt,M.E., et. al. 2009,A Cooperative Multi-agency Reef Fish Monitoring Protocol for the Florida Keys Coral Reef Ecosystem. Retrieve from http://www.coris.noaa.gov/activities/fish_monitoring_protocol/";
String references2 "When used, records should be cited as: South Florida Reef Visual Census; https://www.sefsc.noaa.gov/rvc_analysis20/samples/index";
String sea_name "Gulf of Mexico";
String source "https://doi.org/10.1016/j.fishres.2011.01.012";
String sourceUrl "(local files)";
Float64 Southernmost_Northing 24.5519333;
String standard_name_vocabulary "CF Standard Name Table v77";
String subsetVariables "datasetID, datasetName, ownerInstitutionCode, basisOfRecord, recordedBy, organismQuantityType";
String summary "In 1998, the Florida Fish and Wildlife Conservation Commission's (FWC) Fisheries Independent Monitoring (FIM) program began a long-term monitoring effort of key reef fish populations in the Florida Keys National Marine Sanctuary. This effort was aimed at evaluating the relative abundance, size structure, and habitat utilization of specific reef fish species that are targeted by commercial and recreational fisheries.";
String time_coverage_duration "P00Y2M03DT00H00M00S";
String time_coverage_end "2012-08-02T12:00:00Z";
String time_coverage_resolution "PT0S";
String time_coverage_start "2012-05-31T12:00:00Z";
String title "Dry_Tortugas_Visual_Census_OBIS_Occurrence_v3.5_2012";
Float64 Westernmost_Easting -83.1035167;
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.